alhambra.util

`alhambra.util`#

Module Contents#

Classes#

`ProgressLogger`
`GlueMergeSpec`
`TileMergeSpec`

Functions#

`multimap`(function, data)
`setup_multi`(method[, ncores])
`comp`(endname)	Return the complementary name of a given end (eg, for 'a', return 'a/')
`base`(endname)	Return the base name of a given end name (eg, for either 'a' or 'a/', return 'a')

Attributes#

`DEFAULT_ENERGETICS`
`DEFAULT_MULTIMODEL_ENERGETICS`
`DEFAULT_SD2_MULTIMODEL_ENERGETICS`
`DEFAULT_MM_ENERGETICS_NAMES`
`DEFAULT_REGION_ENERGETICS`
`MAPPER`
`MPOBJECT`

alhambra.util.DEFAULT_ENERGETICS[source]#

alhambra.util.DEFAULT_MULTIMODEL_ENERGETICS[source]#

alhambra.util.DEFAULT_SD2_MULTIMODEL_ENERGETICS[source]#

alhambra.util.DEFAULT_MM_ENERGETICS_NAMES = ['Prot', 'Pysh', 'Peyr', 'None'][source]#

alhambra.util.DEFAULT_REGION_ENERGETICS[source]#

alhambra.util.MAPPER[source]#

alhambra.util.MPOBJECT[source]#

alhambra.util.multimap(function, data)[source]#

alhambra.util.setup_multi(method, ncores=None)[source]#

class alhambra.util.ProgressLogger(logger, N, seconds_interval=60)[source]#

Bases: object

update(i)[source]#

alhambra.util.comp(endname)[source]#: Return the complementary name of a given end (eg, for ‘a’, return ‘a/’)

alhambra.util.base(endname)[source]#: Return the base name of a given end name (eg, for either ‘a’ or ‘a/’, return ‘a’)

class alhambra.util.GlueMergeSpec(ops=[])[source]#

add(a, b)[source]#

copyadd(a, b)[source]#

_rebuild_map()[source]#

eq(a, b)[source]#

class alhambra.util.TileMergeSpec(ops=[])[source]#

add(a, b)[source]#

copyadd(a, b)[source]#

_rebuild_map()[source]#

eq(a, b)[source]#